| Line | Branch | Exec | Source |
|---|---|---|---|
| 1 | /* | ||
| 2 | * Copyright (c) 2000-2022 Inria | ||
| 3 | * All rights reserved. | ||
| 4 | * | ||
| 5 | * Redistribution and use in source and binary forms, with or without | ||
| 6 | * modification, are permitted provided that the following conditions are met: | ||
| 7 | * | ||
| 8 | * * Redistributions of source code must retain the above copyright notice, | ||
| 9 | * this list of conditions and the following disclaimer. | ||
| 10 | * * Redistributions in binary form must reproduce the above copyright notice, | ||
| 11 | * this list of conditions and the following disclaimer in the documentation | ||
| 12 | * and/or other materials provided with the distribution. | ||
| 13 | * * Neither the name of the ALICE Project-Team nor the names of its | ||
| 14 | * contributors may be used to endorse or promote products derived from this | ||
| 15 | * software without specific prior written permission. | ||
| 16 | * | ||
| 17 | * THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" | ||
| 18 | * AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE | ||
| 19 | * IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE | ||
| 20 | * ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE | ||
| 21 | * LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR | ||
| 22 | * CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF | ||
| 23 | * SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS | ||
| 24 | * INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN | ||
| 25 | * CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) | ||
| 26 | * ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE | ||
| 27 | * POSSIBILITY OF SUCH DAMAGE. | ||
| 28 | * | ||
| 29 | * Contact: Bruno Levy | ||
| 30 | * | ||
| 31 | * https://www.inria.fr/fr/bruno-levy | ||
| 32 | * | ||
| 33 | * Inria, | ||
| 34 | * Domaine de Voluceau, | ||
| 35 | * 78150 Le Chesnay - Rocquencourt | ||
| 36 | * FRANCE | ||
| 37 | * | ||
| 38 | */ | ||
| 39 | |||
| 40 | #ifndef GEOGRAM_VORONOI_GENERIC_RVD_UTILS | ||
| 41 | #define GEOGRAM_VORONOI_GENERIC_RVD_UTILS | ||
| 42 | |||
| 43 | #include <geogram/basic/common.h> | ||
| 44 | #include <geogram/voronoi/generic_RVD_vertex.h> | ||
| 45 | #include <geogram/voronoi/generic_RVD_polygon.h> | ||
| 46 | #include <geogram/voronoi/generic_RVD_cell.h> | ||
| 47 | #include <geogram/basic/memory.h> | ||
| 48 | #include <stack> | ||
| 49 | #include <vector> | ||
| 50 | |||
| 51 | /** | ||
| 52 | * \file geogram/voronoi/generic_RVD_utils.h | ||
| 53 | * \brief Some utilities for implementing surfacic | ||
| 54 | * and volumetric restricted Voronoi diagrams. | ||
| 55 | */ | ||
| 56 | |||
| 57 | namespace GEOGen { | ||
| 58 | |||
| 59 | using GEO::NO_INDEX; | ||
| 60 | |||
| 61 | /** | ||
| 62 | * \brief A stack implemented in a GEO::vector. | ||
| 63 | * \details Used by the Android version of | ||
| 64 | * GEOGen::RestrictedVoronoiDiagram. The | ||
| 65 | * std::stack class has some problems with | ||
| 66 | * multithread memory protection issues (it seems that | ||
| 67 | * a SMP-safe global lock on memory is missing | ||
| 68 | * in Android libraries). | ||
| 69 | */ | ||
| 70 | template <class T> | ||
| 71 | class VectorStack { | ||
| 72 | public: | ||
| 73 | /** | ||
| 74 | * \brief Pushes a new item onto the stack. | ||
| 75 | */ | ||
| 76 | void push(const T& x) { | ||
| 77 | rep_.push_back(x); | ||
| 78 | } | ||
| 79 | |||
| 80 | /** | ||
| 81 | * \brief Pops the top of the stack. | ||
| 82 | * \pre !empty() | ||
| 83 | */ | ||
| 84 | void pop() { | ||
| 85 | rep_.pop_back(); | ||
| 86 | } | ||
| 87 | |||
| 88 | /** | ||
| 89 | * \brief Gets the item on the top. | ||
| 90 | * \return a const reference to the item on the top | ||
| 91 | * \pre !empty() | ||
| 92 | */ | ||
| 93 | const T& top() const { | ||
| 94 | return *rep_.rbegin(); | ||
| 95 | } | ||
| 96 | |||
| 97 | /** | ||
| 98 | * \brief Tests whether the stack is empty. | ||
| 99 | */ | ||
| 100 | bool empty() const { | ||
| 101 | return rep_.size() == 0; | ||
| 102 | } | ||
| 103 | |||
| 104 | private: | ||
| 105 | GEO::vector<T> rep_; | ||
| 106 | }; | ||
| 107 | |||
| 108 | /************************************************************************/ | ||
| 109 | |||
| 110 | /** | ||
| 111 | * \brief A (facet,seed) pair. | ||
| 112 | * \details Used by GEOGen::RestrictedVoronoiDiagram | ||
| 113 | * for propagating over the facet graph and the | ||
| 114 | * Delaunay 1-skeleton. | ||
| 115 | */ | ||
| 116 | struct FacetSeed { | ||
| 117 | |||
| 118 | /** | ||
| 119 | * \brief Creates a new FacetSeed | ||
| 120 | * \param[in] f_in index of the facet | ||
| 121 | * \param[in] seed_in index of the seed | ||
| 122 | */ | ||
| 123 | 759037 | FacetSeed(index_t f_in, index_t seed_in) : | |
| 124 | 759037 | f(f_in), | |
| 125 |
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|
759037 | seed(seed_in) { |
| 126 | } | ||
| 127 | |||
| 128 | /** | ||
| 129 | * \brief Creates a new uninitialized FacetSeed | ||
| 130 | * \details F and seed contain random values. | ||
| 131 | */ | ||
| 132 | FacetSeed() { | ||
| 133 | } | ||
| 134 | |||
| 135 | /** | ||
| 136 | * \brief Compares two facet seeds using lexicographic order. | ||
| 137 | * \details Makes it possible to use FacetSeed as keys for | ||
| 138 | * std::set and std::map. | ||
| 139 | */ | ||
| 140 | bool operator< (const FacetSeed& rhs) const { | ||
| 141 | if(f < rhs.f) { | ||
| 142 | return true; | ||
| 143 | } | ||
| 144 | if(f > rhs.f) { | ||
| 145 | return false; | ||
| 146 | } | ||
| 147 | return seed < rhs.seed; | ||
| 148 | } | ||
| 149 | |||
| 150 | index_t f; | ||
| 151 | index_t seed; | ||
| 152 | }; | ||
| 153 | |||
| 154 | /** | ||
| 155 | * \brief A (tetrahedron,seed) pair. | ||
| 156 | * \details Used by GEOGen::RestrictedVoronoiDiagram | ||
| 157 | * for propagating over the tetrahedra graph and the | ||
| 158 | * Delaunay 1-skeleton. | ||
| 159 | */ | ||
| 160 | typedef FacetSeed TetSeed; | ||
| 161 | /************************************************************************/ | ||
| 162 | |||
| 163 | #ifdef GEO_OS_ANDROID | ||
| 164 | // VectorStack uses AlignedAllocator, that is protected | ||
| 165 | // by a global lock under Android (needed because it | ||
| 166 | // seems that malloc() is not SMP-thread-safe under Android). | ||
| 167 | |||
| 168 | /** | ||
| 169 | * \brief A stack of FacetSeed. | ||
| 170 | * \details Used by GEOGen::RestrictedVoronoiDiagram. | ||
| 171 | */ | ||
| 172 | typedef VectorStack<FacetSeed> FacetSeedStack; | ||
| 173 | |||
| 174 | /** | ||
| 175 | * \brief A stack of TetSeed. | ||
| 176 | * \details Used by GEOGen::RestrictedVoronoiDiagram. | ||
| 177 | */ | ||
| 178 | typedef VectorStack<TetSeed> TetSeedStack; | ||
| 179 | |||
| 180 | /** | ||
| 181 | * \brief A stack of seed indices (index_t). | ||
| 182 | * \details Used by GEOGen::RestrictedVoronoiDiagram. | ||
| 183 | */ | ||
| 184 | typedef VectorStack<index_t> SeedStack; | ||
| 185 | #else | ||
| 186 | |||
| 187 | /** | ||
| 188 | * \brief A stack of FacetSeed. | ||
| 189 | * \details Used by GEOGen::RestrictedVoronoiDiagram. | ||
| 190 | */ | ||
| 191 | typedef std::stack<FacetSeed> FacetSeedStack; | ||
| 192 | |||
| 193 | /** | ||
| 194 | * \brief A stack of TetSeed. | ||
| 195 | * \details Used by GEOGen::RestrictedVoronoiDiagram. | ||
| 196 | */ | ||
| 197 | typedef std::stack<TetSeed> TetSeedStack; | ||
| 198 | |||
| 199 | /** | ||
| 200 | * \brief A stack of seed indices (index_t). | ||
| 201 | * \details Used by GEOGen::RestrictedVoronoiDiagram. | ||
| 202 | */ | ||
| 203 | typedef std::stack<index_t> SeedStack; | ||
| 204 | #endif | ||
| 205 | |||
| 206 | /************************************************************************/ | ||
| 207 | |||
| 208 | /** | ||
| 209 | * \brief Stores associations between (facet,seed) pairs and the index of | ||
| 210 | * a connected component. | ||
| 211 | * | ||
| 212 | * \details Used by GEOGen::RestrictedVoronoiDiagram. | ||
| 213 | * The implementation uses an array of (key,value) vectors, | ||
| 214 | * with dynamic reallocation and linear search. | ||
| 215 | * Experimentally, this significantly reduces the memory | ||
| 216 | * footprint and execution time as compared to | ||
| 217 | * std::table<FacetSeed,index_t>. | ||
| 218 | */ | ||
| 219 | class FacetSeedMarking { | ||
| 220 | public: | ||
| 221 | /** | ||
| 222 | * \brief Creates a new FacetSeedMarking | ||
| 223 | * \param[in] nb_seeds total number of seeds | ||
| 224 | */ | ||
| 225 |
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10 | FacetSeedMarking(index_t /* nb_facets*/, index_t nb_seeds) { |
| 226 |
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10 | set_size(nb_seeds); |
| 227 | 10 | } | |
| 228 | |||
| 229 | /** | ||
| 230 | * \brief Tests whether a given facet,seed couple is marked. | ||
| 231 | */ | ||
| 232 | bool is_marked(index_t facet, index_t seed) const { | ||
| 233 | return (find_index(seed, facet) != NO_INDEX); | ||
| 234 | } | ||
| 235 | |||
| 236 | /** | ||
| 237 | * \brief Tests whether a fiven FacetSeed is marked. | ||
| 238 | */ | ||
| 239 | bool is_marked(const FacetSeed& fs) const { | ||
| 240 | return is_marked(fs.f, fs.seed); | ||
| 241 | } | ||
| 242 | |||
| 243 | /** | ||
| 244 | * \brief Gets the index of the connected component associated | ||
| 245 | * with a given FacetSeed. | ||
| 246 | */ | ||
| 247 | index_t get_connected_component(const FacetSeed& fs) const { | ||
| 248 |
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|
179412 | return find_value(fs.seed, fs.f); |
| 249 | } | ||
| 250 | |||
| 251 | /** | ||
| 252 | * \brief Marks a FacetSeed and sets the associated | ||
| 253 | * connected component index. | ||
| 254 | */ | ||
| 255 | void mark(const FacetSeed& fs, index_t conn_comp) { | ||
| 256 | 94552 | insert(fs.seed, fs.f, conn_comp); | |
| 257 | } | ||
| 258 | |||
| 259 | /** | ||
| 260 | * \brief FacetSeedMarking destructor | ||
| 261 | */ | ||
| 262 | 10 | ~FacetSeedMarking() { | |
| 263 |
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31220 | for(index_t i = 0; i < nb_arrays(); ++i) { |
| 264 | 31200 | free(keys_[i]); | |
| 265 | } | ||
| 266 |
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31210 | for(index_t i = 0; i < nb_arrays(); ++i) { |
| 267 | 31200 | free(values_[i]); | |
| 268 | } | ||
| 269 | 10 | } | |
| 270 | |||
| 271 | protected: | ||
| 272 | /** | ||
| 273 | * \brief Gets the number of arrays used internally. | ||
| 274 | */ | ||
| 275 | index_t nb_arrays() const { | ||
| 276 | return index_t(keys_.size()); | ||
| 277 | } | ||
| 278 | |||
| 279 | /** | ||
| 280 | * \brief Sets the number of arrays to be used. | ||
| 281 | * \param[in] nb_arrays number of arrays | ||
| 282 | */ | ||
| 283 | 10 | void set_size(index_t nb_arrays) { | |
| 284 | 10 | keys_.assign(nb_arrays, nullptr); | |
| 285 | 10 | values_.assign(nb_arrays, nullptr); | |
| 286 | 10 | size_.assign(nb_arrays, 0); | |
| 287 | 10 | } | |
| 288 | |||
| 289 | /** | ||
| 290 | * \brief Gets the size of one of the arrays. | ||
| 291 | * \param[in] array index of the array | ||
| 292 | * \pre array < nb_arrays() | ||
| 293 | */ | ||
| 294 | index_t array_size(index_t array) const { | ||
| 295 | 2092133 | return size_[array]; | |
| 296 | } | ||
| 297 | |||
| 298 | /** | ||
| 299 | * \brief Gets the capacity of one of the arrays. | ||
| 300 | * \details It corresponds with the power of two immediately | ||
| 301 | * greater than size. Unlike in std::vector, capacity is implicitly | ||
| 302 | * retrieved from size (this saves one integer | ||
| 303 | * per seed). | ||
| 304 | * \param[in] array index of the array | ||
| 305 | * \pre array < nb_arrays() | ||
| 306 | */ | ||
| 307 | index_t array_capacity(index_t array) const { | ||
| 308 | index_t size = array_size(array); | ||
| 309 |
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94552 | if(size == 0) { |
| 310 | return 0; | ||
| 311 | } | ||
| 312 | index_t result = 1; | ||
| 313 | index_t mask = 1; | ||
| 314 |
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2090616 | for(index_t i = 0; i < 32; i++) { |
| 315 | 2027264 | mask = mask << 1; | |
| 316 |
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2027264 | if((size & mask) != 0) { |
| 317 | result = mask; | ||
| 318 | } | ||
| 319 | } | ||
| 320 | // If size is not already a power of two, | ||
| 321 |
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63352 | if(result != size) { |
| 322 | 25381 | result = result << 1; | |
| 323 | } | ||
| 324 | return result; | ||
| 325 | } | ||
| 326 | |||
| 327 | /** | ||
| 328 | * \brief Finds the index of one of the keys in one of the arrays. | ||
| 329 | * \param[in] array index of the array | ||
| 330 | * \param[in] key the query key | ||
| 331 | * \return the index of \p key in \p array or NO_INDEX if not found | ||
| 332 | */ | ||
| 333 | index_t find_index(index_t array, index_t key) const { | ||
| 334 | 891958 | index_t* K = keys_[array]; | |
| 335 |
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1624335 | if(K[i] == key) { |
| 337 | return i; | ||
| 338 | } | ||
| 339 | } | ||
| 340 | return NO_INDEX; | ||
| 341 | } | ||
| 342 | |||
| 343 | /** | ||
| 344 | * \brief Finds the value associated with a key in one | ||
| 345 | * of the arrays. | ||
| 346 | * \param[in] array index of the array | ||
| 347 | * \param[in] key the query key | ||
| 348 | * \return the value associated with \p key in \p array | ||
| 349 | * or NO_INDEX if not found. | ||
| 350 | */ | ||
| 351 | 358824 | index_t find_value(index_t array, index_t key) const { | |
| 352 | index_t i = find_index(array, key); | ||
| 353 |
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358824 | if(i == NO_INDEX) { |
| 354 | return NO_INDEX; | ||
| 355 | } | ||
| 356 | 179412 | return values_[array][i]; | |
| 357 | } | ||
| 358 | |||
| 359 | /** | ||
| 360 | * \brief Inserts a (key,value) pair into one of the arrays. | ||
| 361 | * \param[in] array index of the array | ||
| 362 | * \param[in] key the key | ||
| 363 | * \param[in] value the value to be associated with \p key | ||
| 364 | */ | ||
| 365 | 94552 | void insert(index_t array, index_t key, index_t value) { | |
| 366 | index_t i = find_index(array, key); | ||
| 367 |
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94552 | if(i == NO_INDEX) { |
| 368 | // If not found, append at the end of array | ||
| 369 | i = size_[array]; | ||
| 370 |
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94552 | if(i == array_capacity(array)) { |
| 371 | // If capacity is reached, grow storage | ||
| 372 | 69171 | index_t new_nb = index_t(2*i); | |
| 373 | 69171 | if(new_nb == 0) { | |
| 374 | new_nb = 1; | ||
| 375 | } | ||
| 376 | 69171 | keys_[array] = reinterpret_cast<index_t*>( | |
| 377 | 69171 | realloc(keys_[array], sizeof(index_t) * new_nb) | |
| 378 | ); | ||
| 379 | 69171 | values_[array] = reinterpret_cast<index_t*>( | |
| 380 | 69171 | realloc(values_[array], sizeof(index_t) * new_nb) | |
| 381 | ); | ||
| 382 | } | ||
| 383 | 94552 | size_[array] = i + 1; | |
| 384 | } | ||
| 385 | 94552 | keys_[array][i] = key; | |
| 386 | 94552 | values_[array][i] = value; | |
| 387 | 94552 | } | |
| 388 | |||
| 389 | private: | ||
| 390 | std::vector<index_t*> keys_; | ||
| 391 | std::vector<index_t*> values_; | ||
| 392 | std::vector<index_t> size_; | ||
| 393 | }; | ||
| 394 | |||
| 395 | /************************************************************************/ | ||
| 396 | |||
| 397 | /** | ||
| 398 | * \brief Stores associations between (tet,seed) pairs and the index of | ||
| 399 | * a connected component. | ||
| 400 | */ | ||
| 401 | typedef FacetSeedMarking TetSeedMarking; | ||
| 402 | |||
| 403 | /************************************************************************/ | ||
| 404 | } | ||
| 405 | |||
| 406 | #endif | ||
| 407 |